Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_5473 | Not Available | Negative | 418882 - 419070 | 7357.87 |
| hypothetical protein | JCM19237_5474 | Not Available | Positive | 419126 - 419281 | 5520.62 |
| rnd efflux system inner membrane transporter cmeb | JCM19237_5475 | Not Available | Negative | 419810 - 423112 | 119308.0 |
| rnd efflux system inner membrane transporter cmeb | JCM19237_5476 | Not Available | Negative | 423182 - 424456 | 45611.3 |
| rnd efflux system membrane fusion protein cmea | JCM19237_5477 | Not Available | Negative | 424466 - 425665 | 43516.9 |
| hded protein | JCM19237_5478 | Not Available | Negative | 425917 - 426513 | 21564.1 |
| hypothetical protein | JCM19237_5479 | Not Available | Negative | 426663 - 427451 | 29344.9 |
| hypothetical protein | JCM19237_5480 | Not Available | Negative | 427802 - 428626 | 30326.0 |
| hypothetical protein | JCM19237_5481 | Not Available | Positive | 428861 - 429193 | 12402.8 |
| type iii effector hoppmaj | JCM19237_5482 | Not Available | Negative | 429235 - 429357 | 4744.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
