Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase | JCM19237_6765 | Not Available | Positive | 4602707 - 4603165 | 16484.0 |
| alcohol dehydrogenase | JCM19237_6766 | Not Available | Positive | 4603162 - 4603689 | 18606.8 |
| transcriptional regulator | JCM19237_6767 | Not Available | Negative | 4603815 - 4604510 | 26034.9 |
| transcriptional regulator | JCM19237_6768 | Not Available | Negative | 4604495 - 4604755 | 9640.91 |
| hypothetical protein | JCM19237_6769 | Not Available | Negative | 4604868 - 4605050 | 6643.19 |
| trna 5-methylaminomethyl-2-thiouridine synthase tusa | JCM19237_6770 | Not Available | Positive | 4605191 - 4605439 | 9243.09 |
| nadh dehydrogenase subunit ii-related protein | JCM19237_6771 | Not Available | Negative | 4605481 - 4605747 | 10361.9 |
| probable transmembrane protein | JCM19237_6772 | Not Available | Negative | 4605976 - 4606590 | 21798.5 |
| outer membrane lipoprotein omp16 precursor | JCM19237_6773 | Not Available | Negative | 4606853 - 4607542 | 23893.2 |
| glycyl-trna synthetase alpha chain | JCM19237_6774 | Not Available | Positive | 4607842 - 4608765 | 34938.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
