Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (uracil(54)-c5)-methyltransferase | JCM19237_7031 | Not Available | Negative | 4501041 - 4501382 | 13387.9 |
| outer membrane vitamin b12 receptor btub | JCM19237_7032 | Not Available | Positive | 4501796 - 4502311 | 17927.7 |
| outer membrane vitamin b12 receptor btub | JCM19237_7033 | Not Available | Positive | 4502362 - 4503609 | 46747.0 |
| conserved hypothetical protein | JCM19237_7034 | Not Available | Positive | 4503667 - 4504326 | 24342.2 |
| glutamate racemase | JCM19237_7035 | Not Available | Positive | 4504420 - 4504800 | 13657.8 |
| glutamate racemase | JCM19237_7036 | Not Available | Positive | 4504773 - 4505207 | 15793.0 |
| rna-binding protein | JCM19237_7037 | Not Available | Negative | 4505179 - 4505637 | 16754.1 |
| phage protein | JCM19237_236 | Not Available | Positive | 4506564 - 4507511 | 34598.7 |
| hypothetical protein | JCM19237_237 | Not Available | Positive | 4508171 - 4509247 | 40666.4 |
| hypothetical protein | JCM19237_238 | Not Available | Negative | 4509289 - 4509717 | 16262.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
