Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coproporphyrinogen iii oxidase | JCM19237_6981 | Not Available | Positive | 4464656 - 4466029 | 52637.0 |
| hypothetical protein | JCM19237_6982 | Not Available | Negative | 4466142 - 4466270 | 4238.21 |
| adenosine deaminase | JCM19237_6983 | Not Available | Negative | 4466434 - 4467018 | 20876.8 |
| adenosine deaminase | JCM19237_6984 | Not Available | Negative | 4467027 - 4467434 | 14956.0 |
| nitrogen regulation protein ntrc | JCM19237_6985 | Not Available | Negative | 4467718 - 4469091 | 50601.3 |
| nitrogen regulation protein ntrb | JCM19237_6986 | Not Available | Negative | 4469216 - 4470265 | 38651.5 |
| hypothetical protein | JCM19237_6987 | Not Available | Negative | 4470384 - 4470764 | 13746.3 |
| glutamine synthetase type i | JCM19237_6988 | Not Available | Negative | 4471077 - 4472486 | 51504.0 |
| gtp-binding protein typa/bipa | JCM19237_6989 | Not Available | Positive | 4472956 - 4474803 | 67947.1 |
| predicted atpase | JCM19237_6990 | Not Available | Positive | 4475076 - 4475504 | 15573.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
