Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integral membrane protein rhomboid family | JCM19237_6951 | Not Available | Negative | 4442934 - 4443440 | 19483.1 |
| hypothetical protein | JCM19237_6952 | Not Available | Negative | 4443514 - 4443633 | 4166.17 |
| glutamate synthase | JCM19237_6953 | Not Available | Negative | 4443639 - 4444322 | 24861.1 |
| hypothetical protein | JCM19237_6954 | Not Available | Negative | 4444303 - 4444920 | 23562.9 |
| hypothetical protein | JCM19237_6955 | Not Available | Positive | 4445005 - 4445202 | 7093.69 |
| putative signal peptide protein | JCM19237_6956 | Not Available | Negative | 4445173 - 4445439 | 8814.68 |
| atp-dependent dna helicase uvrd/pcra | JCM19237_6957 | Not Available | Positive | 4445797 - 4447335 | 58686.1 |
| atp-dependent dna helicase uvrd/pcra | JCM19237_6958 | Not Available | Positive | 4447332 - 4447604 | 9861.84 |
| atp-dependent dna helicase uvrd/pcra | JCM19237_6959 | Not Available | Positive | 4447559 - 4447786 | 9027.19 |
| atp-dependent dna helicase uvrd/pcra | JCM19237_6960 | Not Available | Positive | 4447741 - 4447965 | 8095.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
