Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylate cyclase | JCM19237_6941 | Not Available | Positive | 4436822 - 4438024 | 45304.1 |
| hypothetical protein | JCM19237_6942 | Not Available | Positive | 4438292 - 4438405 | 3881.85 |
| diaminopimelate decarboxylase | JCM19237_6943 | Not Available | Positive | 4438431 - 4439663 | 44815.6 |
| diaminopimelate epimerase | JCM19237_6944 | Not Available | Positive | 4439699 - 4440529 | 30323.3 |
| protein of unknown function duf484 | JCM19237_6945 | Not Available | Positive | 4440526 - 4440888 | 13616.1 |
| protein of unknown function duf484 | JCM19237_6946 | Not Available | Positive | 4440891 - 4441220 | 12870.5 |
| tyrosine recombinase xerc | JCM19237_6947 | Not Available | Positive | 4441486 - 4442124 | 23684.7 |
| putative fmn hydrolase | JCM19237_6948 | Not Available | Positive | 4442160 - 4442294 | 5255.23 |
| putative fmn hydrolase | JCM19237_6949 | Not Available | Positive | 4442303 - 4442731 | 15718.4 |
| hypothetical protein | JCM19237_6950 | Not Available | Positive | 4442728 - 4442892 | 5945.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
