Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensory box/ggdef family protein | JCM19237_6931 | Not Available | Positive | 4425825 - 4426661 | 30996.5 |
| diguanylate cyclase | JCM19237_6932 | Not Available | Positive | 4426624 - 4427586 | 36748.5 |
| diguanylate cyclase | JCM19237_6933 | Not Available | Positive | 4427583 - 4428884 | 48583.2 |
| sam-dependent methyltransferase | JCM19237_6934 | Not Available | Positive | 4428935 - 4429705 | 27718.5 |
| hypothetical protein | JCM19237_6935 | Not Available | Positive | 4429797 - 4430363 | 19763.2 |
| uncharacterized protein ec-hemy | JCM19237_6936 | Not Available | Negative | 4430761 - 4431948 | 43679.1 |
| uroporphyrinogen-iii methyltransferase | JCM19237_6937 | Not Available | Negative | 4431945 - 4433138 | 43615.6 |
| uroporphyrinogen-iii synthase | JCM19237_6938 | Not Available | Negative | 4433131 - 4433898 | 27726.5 |
| porphobilinogen deaminase | JCM19237_6939 | Not Available | Negative | 4433898 - 4434830 | 33548.7 |
| adenylate cyclase | JCM19237_6940 | Not Available | Positive | 4435323 - 4436825 | 57087.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
