Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptide transport atp-binding protein dppd | JCM19237_6921 | Not Available | Positive | 4419016 - 4419312 | 11024.6 |
| dipeptide-binding abc transporter periplasmic substrate-binding component | JCM19237_6922 | Not Available | Positive | 4419417 - 4420970 | 57680.9 |
| peptide abc transporter permease component | JCM19237_6923 | Not Available | Positive | 4421045 - 4421734 | 25516.8 |
| peptide abc transporter permease component | JCM19237_6924 | Not Available | Positive | 4421731 - 4422021 | 10521.0 |
| dipeptide transport system permease protein dppc | JCM19237_6925 | Not Available | Positive | 4422025 - 4422717 | 25790.8 |
| dipeptide transport system permease protein dppc | JCM19237_6926 | Not Available | Positive | 4422672 - 4422962 | 10445.1 |
| deoxyribonuclease tatd | JCM19237_6927 | Not Available | Positive | 4423116 - 4423910 | 29257.0 |
| porphobilinogen synthase | JCM19237_6928 | Not Available | Positive | 4423964 - 4424986 | 37423.9 |
| transcriptional regulator asnc | JCM19237_6929 | Not Available | Negative | 4425080 - 4425541 | 17248.9 |
| hypothetical protein | JCM19237_6930 | Not Available | Negative | 4425672 - 4425809 | 4946.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
