Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system transcriptional activator gcva | JCM19237_922 | Not Available | Negative | 4375710 - 4376642 | 34614.1 |
| cysteine desulfurase csda-csde | JCM19237_923 | Not Available | Positive | 4377113 - 4378024 | 32686.8 |
| cysteine desulfurase csda-csde | JCM19237_924 | Not Available | Positive | 4378049 - 4378333 | 10195.4 |
| cysteine desulfurase csda-csde sulfur acceptor protein csde | JCM19237_925 | Not Available | Positive | 4378342 - 4378773 | 15649.7 |
| hesa/moeb/thif family protein related to ec-ygdl | JCM19237_926 | Not Available | Negative | 4378847 - 4379659 | 29544.7 |
| membrane-bound lytic murein transglycosylase a precursor | JCM19237_927 | Not Available | Negative | 4379768 - 4380850 | 39853.4 |
| hypothetical protein | JCM19237_928 | Not Available | Positive | 4381097 - 4381315 | 8046.77 |
| hypothetical protein | JCM19237_929 | Not Available | Negative | 4381417 - 4381620 | 7789.2 |
| n-acetylglutamate synthase | JCM19237_930 | Not Available | Positive | 4382061 - 4382405 | 12412.3 |
| hypothetical protein | JCM19237_931 | Not Available | Negative | 4382380 - 4382559 | 6217.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
