Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssu ribosomal protein s2p | JCM19237_882 | Not Available | Negative | 4344011 - 4344442 | 15745.7 |
| ssu ribosomal protein s2p | JCM19237_883 | Not Available | Negative | 4344463 - 4344738 | 10206.5 |
| methionine aminopeptidase | JCM19237_884 | Not Available | Positive | 4345041 - 4345916 | 32237.5 |
| [protein-pii] uridylyltransferase | JCM19237_885 | Not Available | Positive | 4346043 - 4346741 | 26068.9 |
| [protein-pii] uridylyltransferase | JCM19237_886 | Not Available | Positive | 4346738 - 4346923 | 7484.9 |
| [protein-pii] uridylyltransferase | JCM19237_887 | Not Available | Positive | 4346878 - 4348704 | 69712.3 |
| hypothetical flavoprotein yqca | JCM19237_888 | Not Available | Negative | 4348844 - 4349302 | 16437.5 |
| o-antigen acetylase | JCM19237_889 | Not Available | Positive | 4349476 - 4350492 | 38148.3 |
| trna pseudouridine synthase c | JCM19237_890 | Not Available | Negative | 4350489 - 4351289 | 30314.4 |
| hypothetical protein yqcc | JCM19237_891 | Not Available | Negative | 4351294 - 4351560 | 9910.96 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
