Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| intramembrane protease rasp/yluc | JCM19237_872 | Not Available | Negative | 4337094 - 4337435 | 11993.2 |
| membrane-associated zinc metalloprotease | JCM19237_873 | Not Available | Negative | 4337432 - 4338448 | 37042.0 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | JCM19237_874 | Not Available | Negative | 4338445 - 4339098 | 23552.5 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | JCM19237_875 | Not Available | Negative | 4339092 - 4339685 | 20693.2 |
| phosphatidate cytidylyltransferase | JCM19237_876 | Not Available | Negative | 4339760 - 4340074 | 10675.3 |
| phosphatidate cytidylyltransferase | JCM19237_877 | Not Available | Negative | 4340059 - 4340556 | 18655.2 |
| undecaprenyl diphosphate synthase | JCM19237_878 | Not Available | Negative | 4340757 - 4341410 | 24383.1 |
| ribosome recycling factor | JCM19237_879 | Not Available | Negative | 4341599 - 4342156 | 20849.3 |
| uridine monophosphate kinase | JCM19237_880 | Not Available | Negative | 4342236 - 4342961 | 26087.7 |
| translation elongation factor ts | JCM19237_881 | Not Available | Negative | 4343052 - 4343897 | 30033.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
