Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna(ile)-lysidine synthetase | JCM19237_862 | Not Available | Negative | 4324122 - 4324898 | 28343.6 |
| acetyl-coenzyme a carboxyl transferase alpha chain | JCM19237_863 | Not Available | Negative | 4325050 - 4326009 | 35149.3 |
| dna polymerase iii alpha subunit | JCM19237_864 | Not Available | Negative | 4326066 - 4329545 | 129685.0 |
| ribonuclease hii | JCM19237_865 | Not Available | Negative | 4329709 - 4330290 | 20916.2 |
| lipid-a-disaccharide synthase | JCM19237_866 | Not Available | Negative | 4330393 - 4331475 | 40391.3 |
| acyl-[acyl-carrier-protein]-udp-n- acetylglucosamine o-acyltransferase | JCM19237_867 | Not Available | Negative | 4331546 - 4332334 | 28259.8 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase | JCM19237_868 | Not Available | Negative | 4332334 - 4332786 | 16947.6 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | JCM19237_869 | Not Available | Negative | 4332883 - 4333911 | 36046.4 |
| outer membrane protein h precursor | JCM19237_870 | Not Available | Negative | 4334125 - 4334580 | 17199.6 |
| outer membrane protein assembly factor yaet precursor | JCM19237_871 | Not Available | Negative | 4334598 - 4337057 | 92093.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
