Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolyl-trna synthetase bacterial type | JCM19237_852 | Not Available | Positive | 4317269 - 4318261 | 36641.7 |
| prolyl-trna synthetase bacterial type | JCM19237_853 | Not Available | Positive | 4318273 - 4318839 | 20649.0 |
| patatin | JCM19237_854 | Not Available | Positive | 4319157 - 4320095 | 34897.7 |
| diguanylate cyclase | JCM19237_855 | Not Available | Positive | 4320213 - 4321028 | 31525.9 |
| hypothetical protein | JCM19237_856 | Not Available | Positive | 4321171 - 4321377 | 7506.96 |
| hypothetical protein | JCM19237_857 | Not Available | Positive | 4321377 - 4321565 | 7136.69 |
| tryptophan-specific transport protein | JCM19237_858 | Not Available | Negative | 4321686 - 4322834 | 40439.9 |
| cytochrome c553 | JCM19237_859 | Not Available | Negative | 4323130 - 4323324 | 7124.74 |
| hypothetical protein | JCM19237_860 | Not Available | Negative | 4323345 - 4323524 | 6570.29 |
| trna(ile)-lysidine synthetase | JCM19237_861 | Not Available | Negative | 4323478 - 4324110 | 23110.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
