Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | JCM19237_1454 | Not Available | Negative | 4248849 - 4249133 | 10222.3 |
| two-component response regulator | JCM19237_1455 | Not Available | Negative | 4249108 - 4249620 | 19625.3 |
| ggdef family protein | JCM19237_1456 | Not Available | Negative | 4249626 - 4250084 | 17721.8 |
| two-component response regulator | JCM19237_1457 | Not Available | Negative | 4250065 - 4250469 | 15731.3 |
| short chain dehydrogenase | JCM19237_1458 | Not Available | Negative | 4250833 - 4251126 | 10413.4 |
| hydrolase of alkaline phosphatase superfamily | JCM19237_1459 | Not Available | Negative | 4251682 - 4253355 | 62947.9 |
| hydrolase of alkaline phosphatase superfamily | JCM19237_1460 | Not Available | Negative | 4253361 - 4253525 | 6216.49 |
| hypothetical protein | JCM19237_1461 | Not Available | Negative | 4253578 - 4253796 | 7815.37 |
| nucleoid-associated protein ndpa | JCM19237_1462 | Not Available | Positive | 4253881 - 4254894 | 38273.0 |
| hpt domain | JCM19237_1463 | Not Available | Positive | 4255144 - 4255959 | 30258.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
