Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator for fatty acid degradation fadr gntr family | JCM19237_1424 | Not Available | Positive | 4225267 - 4225677 | 15050.8 |
| transcriptional regulator for fatty acid degradation fadr gntr family | JCM19237_1425 | Not Available | Positive | 4225665 - 4225907 | 9662.69 |
| spovr-like protein | JCM19237_1426 | Not Available | Negative | 4226035 - 4227564 | 60025.8 |
| hypothetical protein | JCM19237_1427 | Not Available | Negative | 4227587 - 4228513 | 36181.1 |
| serine protein kinase | JCM19237_1428 | Not Available | Negative | 4228889 - 4229578 | 27105.0 |
| serine protein kinase | JCM19237_1429 | Not Available | Negative | 4229703 - 4230821 | 41771.8 |
| glyoxalase family protein | JCM19237_1430 | Not Available | Positive | 4231530 - 4231775 | 8462.11 |
| aldose 1-epimerase family protein yead | JCM19237_1431 | Not Available | Negative | 4231881 - 4232591 | 26084.5 |
| aldose 1-epimerase family protein yead | JCM19237_1432 | Not Available | Negative | 4232588 - 4232755 | 6036.48 |
| nad-dependent glyceraldehyde-3-phosphate dehydrogenase | JCM19237_1433 | Not Available | Negative | 4233004 - 4233999 | 35277.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
