Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycgn | JCM19237_1414 | Not Available | Positive | 4218094 - 4218561 | 17889.9 |
| pp_05416 | JCM19237_1415 | Not Available | Negative | 4219148 - 4219735 | Not Available |
| pp_05417 | JCM19237_1416 | Not Available | Negative | 4219735 - 4220088 | Not Available |
| predicted nucleoside-diphosphate-sugar epimerases | JCM19237_1417 | Not Available | Negative | 4220159 - 4220839 | 25045.8 |
| protein export cytoplasm protein seca atpase rna helicase | JCM19237_1418 | Not Available | Positive | 4221091 - 4221738 | 23169.0 |
| 5-methyl-dctp pyrophosphohydrolase | JCM19237_1419 | Not Available | Positive | 4221728 - 4222156 | 15742.6 |
| periplasmic thiol:disulfide oxidoreductase dsbb | JCM19237_1420 | Not Available | Negative | 4222250 - 4222771 | 19366.0 |
| na+/h+ antiporter nhab | JCM19237_1421 | Not Available | Negative | 4222930 - 4223757 | 30057.3 |
| na+/h+ antiporter nhab | JCM19237_1422 | Not Available | Negative | 4223730 - 4224518 | 28791.2 |
| transcriptional regulator for fatty acid degradation fadr gntr family | JCM19237_1423 | Not Available | Positive | 4225058 - 4225270 | 7986.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
