Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | JCM19237_1404 | Not Available | Positive | 4209181 - 4210041 | 30827.3 |
| o-succinylbenzoate synthase | JCM19237_1405 | Not Available | Positive | 4210164 - 4211138 | 35384.5 |
| o-succinylbenzoic acid-coa ligase | JCM19237_1406 | Not Available | Positive | 4211429 - 4212574 | 41823.2 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | JCM19237_1407 | Not Available | Negative | 4212716 - 4214590 | 68626.1 |
| homeodomain-like | JCM19237_1408 | Not Available | Negative | 4214727 - 4215146 | 15671.7 |
| hypothetical protein | JCM19237_1409 | Not Available | Negative | 4215637 - 4216035 | 15386.9 |
| hypothetical protein | JCM19237_1410 | Not Available | Positive | 4216278 - 4216664 | 13586.8 |
| hypothetical protein | JCM19237_1411 | Not Available | Positive | 4216651 - 4217124 | 17905.5 |
| dna-binding protein inhibitor id-2-related protein | JCM19237_1412 | Not Available | Positive | 4217372 - 4217563 | 6825.22 |
| proteinase inhibitor putative | JCM19237_1413 | Not Available | Negative | 4217626 - 4217856 | 8386.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
