Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_1394 | Not Available | Negative | 4200832 - 4201005 | 6058.67 |
| integral membrane protein | JCM19237_1395 | Not Available | Negative | 4200984 - 4201388 | 14855.5 |
| hypothetical protein | JCM19237_1396 | Not Available | Positive | 4201462 - 4202058 | 21839.0 |
| deoxyguanosinetriphosphate triphosphohydrolase | JCM19237_1397 | Not Available | Negative | 4202229 - 4203605 | 52100.7 |
| nucleotidase yfbr hd superfamily | JCM19237_1398 | Not Available | Negative | 4203605 - 4204189 | 22151.5 |
| aspartate aminotransferase | JCM19237_1399 | Not Available | Negative | 4204359 - 4205492 | 42266.0 |
| hypothetical protein | JCM19237_1400 | Not Available | Positive | 4205542 - 4205670 | 4899.94 |
| menaquinone-specific isochorismate synthase | JCM19237_1401 | Not Available | Positive | 4206146 - 4207462 | 48925.0 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | JCM19237_1402 | Not Available | Positive | 4207459 - 4208364 | 32609.2 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | JCM19237_1403 | Not Available | Positive | 4208337 - 4209197 | 30761.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
