Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease proteolytic subunit | JCM19237_1384 | Not Available | Positive | 4193088 - 4193711 | 22949.6 |
| atp-dependent clp protease atp-binding subunit clpx | JCM19237_1385 | Not Available | Positive | 4193827 - 4195107 | 46728.0 |
| atp-dependent protease la type i | JCM19237_1386 | Not Available | Positive | 4195237 - 4196160 | 35140.7 |
| atp-dependent protease la type i | JCM19237_1387 | Not Available | Positive | 4196138 - 4197607 | 53803.9 |
| dna-binding protein hu-beta | JCM19237_1388 | Not Available | Positive | 4197827 - 4198099 | 9291.02 |
| peptidyl-prolyl cis-trans isomerase ppid | JCM19237_1389 | Not Available | Positive | 4198358 - 4198585 | 8327.0 |
| peptidyl-prolyl cis-trans isomerase ppid | JCM19237_1390 | Not Available | Positive | 4198585 - 4200246 | 60880.3 |
| hypothetical protein | JCM19237_1391 | Not Available | Negative | 4200263 - 4200376 | 4113.94 |
| hypothetical protein | JCM19237_1392 | Not Available | Positive | 4200421 - 4200573 | 5050.16 |
| competence protein comea | JCM19237_1393 | Not Available | Positive | 4200579 - 4200767 | 6758.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
