Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional activator of hca cluster | JCM19237_5423 | Not Available | Negative | 371919 - 372758 | 32369.7 |
| glucan 1,6-alpha-glucosidase | JCM19237_5424 | Not Available | Positive | 373077 - 373595 | 19867.4 |
| glucan 1,6-alpha-glucosidase | JCM19237_5425 | Not Available | Positive | 373634 - 374719 | 40961.4 |
| pts system mannitol-specific iic component /pts system mannitol-specific iib component / pts system mannitol-specific iia component | JCM19237_5426 | Not Available | Positive | 375492 - 377399 | 67023.7 |
| mannitol-1-phosphate 5-dehydrogenase | JCM19237_5427 | Not Available | Positive | 377617 - 378762 | 41790.9 |
| pts system mannitol-specific iic component /pts system mannitol-specific iib component / pts system mannitol-specific iia component | JCM19237_5428 | Not Available | Positive | 378880 - 379026 | 5173.51 |
| pts system mannitol-specific iib component /pts system mannitol-specific iic component | JCM19237_5429 | Not Available | Positive | 379044 - 379910 | 29702.5 |
| mannitol operon repressor | JCM19237_5430 | Not Available | Positive | 380047 - 380577 | 19608.7 |
| glycogen debranching enzyme | JCM19237_5431 | Not Available | Negative | 380763 - 381497 | 27950.6 |
| glycogen debranching enzyme | JCM19237_5432 | Not Available | Negative | 381810 - 382688 | 33043.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
