Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrofolate synthase | JCM19237_1365 | Not Available | Positive | 4178246 - 4178902 | 23583.5 |
| dihydrofolate synthase | JCM19237_1366 | Not Available | Positive | 4178995 - 4179486 | 17695.0 |
| dedd protein | JCM19237_1367 | Not Available | Positive | 4179545 - 4180156 | 22065.3 |
| colicin v production protein | JCM19237_1368 | Not Available | Positive | 4180218 - 4180712 | 18117.4 |
| amidophosphoribosyltransferase | JCM19237_1369 | Not Available | Positive | 4180860 - 4182377 | 55988.9 |
| inner membrane protein yip1 | JCM19237_1370 | Not Available | Negative | 4182485 - 4183084 | 21745.1 |
| cyn operon transcriptional activator | JCM19237_1371 | Not Available | Negative | 4183320 - 4184195 | 33370.4 |
| response regulator | JCM19237_1372 | Not Available | Positive | 4184481 - 4185254 | 28213.3 |
| response regulator | JCM19237_1373 | Not Available | Positive | 4185251 - 4185571 | 11370.5 |
| hypothetical protein | JCM19237_1374 | Not Available | Negative | 4185720 - 4185851 | 4719.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
