Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transporter | JCM19237_3354 | Not Available | Negative | 4172257 - 4172739 | 17472.2 |
| phosphatidylserine decarboxylase | JCM19237_3355 | Not Available | Negative | 4172944 - 4173552 | 21883.2 |
| phosphatidylserine decarboxylase | JCM19237_3356 | Not Available | Negative | 4173549 - 4173827 | 10316.2 |
| hypothetical protein | JCM19237_3357 | Not Available | Positive | 4173916 - 4174050 | 4529.46 |
| ribosome small subunit-stimulated gtpase engc | JCM19237_3358 | Not Available | Negative | 4174016 - 4175068 | 39078.2 |
| 3'-to-5' oligoribonuclease | JCM19237_3359 | Not Available | Positive | 4175209 - 4175754 | 20894.8 |
| trna pseudouridine synthase a | JCM19237_1361 | Not Available | Positive | 4176058 - 4176339 | 10449.5 |
| trna pseudouridine synthase a | JCM19237_1362 | Not Available | Positive | 4176330 - 4176842 | 19432.2 |
| acetyl-coenzyme a carboxyl transferase beta chain | JCM19237_1363 | Not Available | Positive | 4177266 - 4177622 | 12937.8 |
| acetyl-coenzyme a carboxyl transferase beta chain | JCM19237_1364 | Not Available | Positive | 4177607 - 4178032 | 15264.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
