Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c4-dicarboxylate transporter dcua | JCM19237_3324 | Not Available | Negative | 4148738 - 4149634 | 30859.7 |
| aspartate ammonia-lyase | JCM19237_3325 | Not Available | Negative | 4149779 - 4151242 | 53203.1 |
| fxsa protein | JCM19237_3326 | Not Available | Positive | 4151873 - 4152415 | 19548.0 |
| mate family of mdr efflux pumps | JCM19237_3327 | Not Available | Negative | 4152495 - 4153841 | 47927.3 |
| heat shock protein 60 family co-chaperone groes | JCM19237_3328 | Not Available | Positive | 4154051 - 4154380 | 11822.2 |
| heat shock protein 60 family chaperone groel | JCM19237_3329 | Not Available | Positive | 4154382 - 4156028 | 57497.4 |
| arginine/ornithine antiporter arcd | JCM19237_3330 | Not Available | Negative | 4157180 - 4157548 | 12893.8 |
| hypothetical protein | JCM19237_3331 | Not Available | Negative | 4157578 - 4157703 | 4451.65 |
| ribosomal protein s6 glutaminyl transferase | JCM19237_3332 | Not Available | Negative | 4157787 - 4158449 | 23375.6 |
| ribosomal protein s6 glutaminyl transferase | JCM19237_3333 | Not Available | Negative | 4158449 - 4158694 | 9271.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
