Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium:solute symporter associated protein | JCM19237_3314 | Not Available | Negative | 4142401 - 4142667 | 10077.2 |
| transcriptional regulator luxr family | JCM19237_3315 | Not Available | Negative | 4142884 - 4143519 | 23100.1 |
| hypothetical protein | JCM19237_3316 | Not Available | Positive | 4143707 - 4143979 | 10116.5 |
| diguanylate cyclase | JCM19237_3317 | Not Available | Positive | 4143946 - 4144881 | 35165.0 |
| cytochrome c-type biogenesis protein dsbd protein-disulfide reductase | JCM19237_3318 | Not Available | Negative | 4144944 - 4146437 | 53169.3 |
| hypothetical protein | JCM19237_3319 | Not Available | Negative | 4146667 - 4146819 | 5441.64 |
| hypothetical protein | JCM19237_3320 | Not Available | Negative | 4146845 - 4147468 | 23252.5 |
| hypothetical protein | JCM19237_3321 | Not Available | Negative | 4147555 - 4147770 | 7764.43 |
| c4-dicarboxylate transporter dcua | JCM19237_3322 | Not Available | Negative | 4148371 - 4148610 | 8018.05 |
| c4-dicarboxylate transporter dcua | JCM19237_3323 | Not Available | Negative | 4148610 - 4148759 | 5444.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
