Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted signal-transduction protein containing camp-binding and cbs domains | JCM19237_3244 | Not Available | Negative | 4095164 - 4096153 | 36195.4 |
| predicted signal-transduction protein containing camp-binding and cbs domains | JCM19237_3245 | Not Available | Negative | 4096164 - 4096442 | 10266.0 |
| probable 3-phenylpropionic acid transporter | JCM19237_3246 | Not Available | Positive | 4096840 - 4096989 | 5530.08 |
| probable 3-phenylpropionic acid transporter | JCM19237_3247 | Not Available | Positive | 4096991 - 4097485 | 17907.1 |
| probable 3-phenylpropionic acid transporter | JCM19237_3248 | Not Available | Positive | 4097544 - 4097906 | 12882.0 |
| sensor histidine kinase | JCM19237_3249 | Not Available | Positive | 4098299 - 4101193 | 104686.0 |
| sensor histidine kinase | JCM19237_3250 | Not Available | Positive | 4101181 - 4101657 | 17246.9 |
| flagellar biosynthesis protein flha | JCM19237_3251 | Not Available | Negative | 4101761 - 4101997 | 8732.82 |
| flagellar biosynthesis protein flha | JCM19237_3252 | Not Available | Negative | 4102021 - 4103127 | 40036.6 |
| flagellar biosynthesis protein flha | JCM19237_3253 | Not Available | Negative | 4103145 - 4103552 | 14347.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
