Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_3214 | Not Available | Negative | 4075727 - 4075864 | 5431.72 |
| branched-chain amino acid transport system carrier protein | JCM19237_3215 | Not Available | Positive | 4075848 - 4075973 | 4385.63 |
| branched-chain amino acid transport system carrier protein | JCM19237_3216 | Not Available | Positive | 4075970 - 4076398 | 14885.7 |
| branched-chain amino acid transport system carrier protein | JCM19237_3217 | Not Available | Positive | 4076415 - 4076627 | 7567.54 |
| branched-chain amino acid transport system carrier protein | JCM19237_3218 | Not Available | Positive | 4076663 - 4077166 | 17394.9 |
| cbs-domain containing protein | JCM19237_3219 | Not Available | Negative | 4077257 - 4077928 | 25428.4 |
| dna-binding protein hu-alpha | JCM19237_3220 | Not Available | Positive | 4078540 - 4078812 | 9488.43 |
| peptidyl-prolyl cis-trans isomerase | JCM19237_3221 | Not Available | Positive | 4079083 - 4079574 | 18583.1 |
| phosphoribosylamine-glycine ligase | JCM19237_3222 | Not Available | Negative | 4079677 - 4080969 | 45538.1 |
| imp cyclohydrolase | JCM19237_3223 | Not Available | Negative | 4081253 - 4081825 | 20398.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
