Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l1p | JCM19237_3194 | Not Available | Positive | 4059443 - 4060147 | 24822.0 |
| lsu ribosomal protein l10p | JCM19237_3195 | Not Available | Positive | 4060389 - 4060883 | 17551.1 |
| lsu ribosomal protein l7/l12 | JCM19237_3196 | Not Available | Positive | 4060943 - 4061308 | 12237.7 |
| hypothetical protein | JCM19237_3197 | Not Available | Negative | 4061338 - 4061460 | 4522.42 |
| dna-directed rna polymerase beta subunit | JCM19237_3198 | Not Available | Positive | 4061532 - 4062992 | 55469.4 |
| dna-directed rna polymerase beta subunit | JCM19237_3199 | Not Available | Positive | 4062992 - 4065004 | 73758.1 |
| dna-directed rna polymerase beta subunit | JCM19237_3200 | Not Available | Positive | 4065127 - 4065555 | 15956.1 |
| dna-directed rna polymerase beta' subunit | JCM19237_3201 | Not Available | Positive | 4065656 - 4067011 | 51796.6 |
| dna-directed rna polymerase beta' subunit | JCM19237_3202 | Not Available | Positive | 4067050 - 4069872 | 102030.0 |
| regulator of sigma d | JCM19237_3203 | Not Available | Negative | 4070064 - 4070549 | 18275.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
