Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_4643 | Not Available | Positive | 4036911 - 4037243 | 12519.8 |
| sodium/glutamate symport protein | JCM19237_4644 | Not Available | Positive | 4037986 - 4039158 | 41997.2 |
| hypothetical protein | JCM19237_4645 | Not Available | Positive | 4039401 - 4039637 | 9333.12 |
| oxalate/formate antiporter | JCM19237_4646 | Not Available | Positive | 4039967 - 4040842 | 30448.2 |
| oxalate/formate antiporter | JCM19237_4647 | Not Available | Positive | 4040842 - 4041129 | 10474.0 |
| peptide deformylase | JCM19237_4648 | Not Available | Negative | 4041359 - 4041808 | 16475.0 |
| hypothetical protein | JCM19237_4649 | Not Available | Negative | 4041843 - 4041980 | 5211.51 |
| hypothetical protein | JCM19237_4650 | Not Available | Negative | 4041968 - 4042315 | 13459.5 |
| putative methyltransferase atu0936 | JCM19237_4651 | Not Available | Negative | 4042326 - 4042499 | 6546.91 |
| putative methyltransferase atu0936 | JCM19237_4652 | Not Available | Negative | 4042474 - 4042962 | 18072.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
