Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative phosphatidylglycerophosphate synthase | JCM19237_4613 | Not Available | Positive | 4018028 - 4018219 | 7321.09 |
| putative phosphatidylglycerophosphate synthase | JCM19237_4614 | Not Available | Positive | 4018296 - 4018637 | 12534.4 |
| hypothetical protein | JCM19237_4615 | Not Available | Positive | 4018755 - 4019003 | 9249.87 |
| lysr-family transcriptional regulator ydhb | JCM19237_4616 | Not Available | Negative | 4019171 - 4019614 | 16813.4 |
| lysr-family transcriptional regulator ydhb | JCM19237_4617 | Not Available | Negative | 4019611 - 4020072 | 17678.2 |
| bicyclomycin resistance protein | JCM19237_4618 | Not Available | Positive | 4020214 - 4020834 | 22362.9 |
| putative transport protein | JCM19237_4619 | Not Available | Positive | 4020858 - 4021415 | 19882.9 |
| hypothetical protein | JCM19237_4620 | Not Available | Negative | 4021655 - 4021804 | 5880.05 |
| arginine abc transporter atp-binding protein artp | JCM19237_4621 | Not Available | Positive | 4021861 - 4022589 | 26696.4 |
| arginine abc transporter periplasmic arginine-binding protein arti | JCM19237_4622 | Not Available | Positive | 4022670 - 4023401 | 26950.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
