Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_4603 | Not Available | Positive | 4011404 - 4012006 | 22925.9 |
| uncharacterized membrane protein | JCM19237_4604 | Not Available | Positive | 4012044 - 4012664 | 22569.3 |
| uncharacterized membrane protein | JCM19237_4605 | Not Available | Positive | 4012822 - 4013283 | 16735.2 |
| uncharacterized membrane protein | JCM19237_4606 | Not Available | Positive | 4013280 - 4013771 | 17824.1 |
| uncharacterized membrane protein | JCM19237_4607 | Not Available | Positive | 4013782 - 4014198 | 15094.1 |
| abc transporter periplasmic substrate-binding protein ynjb | JCM19237_4608 | Not Available | Positive | 4014224 - 4014865 | 23611.8 |
| abc transporter periplasmic substrate-binding protein ynjb | JCM19237_4609 | Not Available | Positive | 4015048 - 4015455 | 14714.3 |
| abc transporter permease protein ynjc | JCM19237_4610 | Not Available | Positive | 4015471 - 4016490 | 37570.3 |
| abc transporter permease protein ynjc | JCM19237_4611 | Not Available | Positive | 4017005 - 4017364 | 12613.3 |
| abc transporter atp-binding protein ynjd | JCM19237_4612 | Not Available | Positive | 4017345 - 4018034 | 25328.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
