Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium-dependent transporter | JCM19237_4583 | Not Available | Positive | 3995481 - 3996152 | 24148.2 |
| hypothetical protein | JCM19237_4584 | Not Available | Positive | 3996580 - 3997107 | 19620.1 |
| hypothetical protein | JCM19237_4585 | Not Available | Positive | 3997258 - 3998166 | 34303.8 |
| glutamate decarboxylase eukaryotic type | JCM19237_4586 | Not Available | Positive | 3998285 - 3998488 | 7557.99 |
| glutamate decarboxylase eukaryotic type | JCM19237_4587 | Not Available | Positive | 3998858 - 3999898 | 38770.8 |
| torcad operon transcriptional regulatory protein torr | JCM19237_4588 | Not Available | Negative | 4000603 - 4000836 | 8899.89 |
| torcad operon transcriptional regulatory protein torr | JCM19237_4589 | Not Available | Negative | 4000854 - 4001315 | 17604.3 |
| cytochrome c-type protein torc | JCM19237_4590 | Not Available | Positive | 4001516 - 4002682 | 43279.5 |
| trimethylamine-n-oxide reductase | JCM19237_4591 | Not Available | Positive | 4002751 - 4004505 | 64657.7 |
| trimethylamine-n-oxide reductase | JCM19237_4592 | Not Available | Positive | 4004496 - 4004660 | 6175.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
