Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| attf / attg component of attefgh abc transport system | JCM19237_4543 | Not Available | Negative | 3963479 - 3965062 | 58062.2 |
| atte component of attefgh abc transport system | JCM19237_4544 | Not Available | Negative | 3965103 - 3965774 | 24590.9 |
| hypothetical protein | JCM19237_4545 | Not Available | Positive | 3965959 - 3966081 | 4625.55 |
| predicted nucleoside-diphosphate-sugar epimerases | JCM19237_4546 | Not Available | Positive | 3966220 - 3967629 | 53052.2 |
| metabolite transporter (dmt) superfamily | JCM19237_4547 | Not Available | Positive | 3967949 - 3968512 | 20253.5 |
| metabolite transporter (dmt) superfamily | JCM19237_4548 | Not Available | Positive | 3968563 - 3968697 | 4727.77 |
| metabolite transporter (dmt) superfamily | JCM19237_4549 | Not Available | Positive | 3968687 - 3968800 | 4036.16 |
| putative secreted protein | JCM19237_4550 | Not Available | Negative | 3969037 - 3969792 | 27855.4 |
| beta-hexosaminidase | JCM19237_4551 | Not Available | Negative | 3969867 - 3971108 | 46413.1 |
| hypothetical protein | JCM19237_4552 | Not Available | Negative | 3972035 - 3972583 | 19824.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
