Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 3931877 - 3931961 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 3932361 - 3932446 | Not Available |
| o-antigen acetylase | JCM19237_3094 | Not Available | Positive | 3932626 - 3933312 | 26018.3 |
| o-antigen acetylase | JCM19237_3095 | Not Available | Positive | 3933662 - 3934558 | 34128.9 |
| l-threonine 3-dehydrogenase | JCM19237_4507 | Not Available | Negative | 3935235 - 3936086 | 30616.0 |
| 2-amino-3-ketobutyrate coenzyme a ligase | JCM19237_4508 | Not Available | Negative | 3936409 - 3936867 | 16408.8 |
| 2-amino-3-ketobutyrate coenzyme a ligase | JCM19237_4509 | Not Available | Negative | 3936872 - 3937600 | 26343.2 |
| transcriptional regulator lysr family | JCM19237_4510 | Not Available | Positive | 3938090 - 3938416 | 12005.9 |
| transcriptional regulator lysr family | JCM19237_4511 | Not Available | Positive | 3938422 - 3939012 | 22019.6 |
| hypothetical protein | JCM19237_4512 | Not Available | Positive | 3939382 - 3939843 | 17746.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
