Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| valyl-trna synthetase | JCM19237_3084 | Not Available | Negative | 3922972 - 3924714 | 66257.2 |
| valyl-trna synthetase | JCM19237_3085 | Not Available | Negative | 3924765 - 3924938 | 6357.42 |
| valyl-trna synthetase | JCM19237_3086 | Not Available | Negative | 3924916 - 3925233 | 11705.0 |
| valyl-trna synthetase | JCM19237_3087 | Not Available | Negative | 3925212 - 3925823 | 23257.5 |
| dna polymerase iii chi subunit | JCM19237_3088 | Not Available | Negative | 3925959 - 3926300 | 12757.1 |
| cytosol aminopeptidase pepa | JCM19237_3089 | Not Available | Negative | 3926352 - 3927860 | 54490.8 |
| predicted permease | JCM19237_3090 | Not Available | Positive | 3928055 - 3929071 | 37370.0 |
| predicted permease | JCM19237_3091 | Not Available | Positive | 3929153 - 3930223 | 39617.1 |
| predicted transmembrane protein | JCM19237_3092 | Not Available | Negative | 3930365 - 3930796 | 15710.5 |
| hypothetical protein | JCM19237_3093 | Not Available | Positive | 3931105 - 3931308 | 7383.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
