Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate-ammonia-ligase adenylyltransferase | JCM19237_3054 | Not Available | Positive | 3900309 - 3901202 | 33666.3 |
| adp-heptose synthase | JCM19237_3055 | Not Available | Positive | 3901317 - 3902750 | 50530.0 |
| type i secretion outer membrane protein tolc precursor | JCM19237_3056 | Not Available | Negative | 3902887 - 3903546 | 23876.9 |
| type i secretion outer membrane protein tolc precursor | JCM19237_3057 | Not Available | Negative | 3903597 - 3904172 | 21354.4 |
| adp-ribose pyrophosphatase | JCM19237_3058 | Not Available | Positive | 3904370 - 3905050 | 25304.8 |
| hypothetical protein | JCM19237_3059 | Not Available | Positive | 3905109 - 3905537 | 16604.8 |
| 3',5'-cyclic-nucleotide phosphodiesterase | JCM19237_3060 | Not Available | Positive | 3905607 - 3906392 | 28916.2 |
| putative esterase | JCM19237_3061 | Not Available | Positive | 3906497 - 3906970 | 17464.6 |
| topoisomerase iv subunit b | JCM19237_3062 | Not Available | Positive | 3907231 - 3907350 | 4268.2 |
| topoisomerase iv subunit b | JCM19237_3063 | Not Available | Positive | 3907442 - 3908968 | 56562.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
