Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 3879702 - 3879777 | Not Available |
| rna polymerase sigma factor rpod | JCM19237_3025 | Not Available | Negative | 3879995 - 3880744 | 28841.2 |
| rna polymerase sigma factor rpod | JCM19237_3026 | Not Available | Negative | 3880875 - 3881720 | 31524.6 |
| dna primase | JCM19237_3027 | Not Available | Negative | 3881932 - 3882723 | 29550.8 |
| dna primase | JCM19237_3028 | Not Available | Negative | 3882681 - 3883127 | 16773.6 |
| dna primase | JCM19237_3029 | Not Available | Negative | 3883136 - 3883690 | 20668.0 |
| transamidase gatb domain protein | JCM19237_3030 | Not Available | Negative | 3883864 - 3884307 | 16037.7 |
| ssu ribosomal protein s21p | JCM19237_3031 | Not Available | Negative | 3884335 - 3884550 | 8498.56 |
| tsad/kae1/qri7 protein | JCM19237_3032 | Not Available | Positive | 3884733 - 3885341 | 21550.0 |
| tsad/kae1/qri7 protein | JCM19237_3033 | Not Available | Positive | 3885334 - 3885645 | 11449.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
