Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane fusion protein of rnd family multidrug efflux pump | JCM19237_3005 | Not Available | Positive | 3863847 - 3864152 | 10832.9 |
| membrane fusion protein of rnd family multidrug efflux pump | JCM19237_3006 | Not Available | Positive | 3864127 - 3864684 | 19860.3 |
| cation/multidrug efflux pump | JCM19237_3007 | Not Available | Positive | 3864681 - 3865256 | 21148.7 |
| cation/multidrug efflux pump | JCM19237_3008 | Not Available | Positive | 3865259 - 3865606 | 12897.6 |
| cation/multidrug efflux pump | JCM19237_3009 | Not Available | Positive | 3865570 - 3866673 | 40103.1 |
| cation/multidrug efflux pump | JCM19237_3010 | Not Available | Positive | 3866705 - 3867382 | 24935.3 |
| cation/multidrug efflux pump | JCM19237_3011 | Not Available | Positive | 3867388 - 3867786 | 14688.5 |
| membrane-associated phospholipid phosphatase | JCM19237_3012 | Not Available | Positive | 3867922 - 3868425 | 18399.4 |
| glycosyltransferase | JCM19237_3013 | Not Available | Positive | 3868435 - 3869016 | 21924.3 |
| glycosyltransferase | JCM19237_3014 | Not Available | Positive | 3869010 - 3869537 | 19798.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
