Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase small subunit | JCM19237_2995 | Not Available | Negative | 3857352 - 3857657 | 11469.5 |
| 3-isopropylmalate dehydratase small subunit | JCM19237_2996 | Not Available | Negative | 3857657 - 3857953 | 11013.1 |
| 3-isopropylmalate dehydratase large subunit | JCM19237_2997 | Not Available | Negative | 3857970 - 3858413 | 15674.7 |
| 3-isopropylmalate dehydratase large subunit | JCM19237_2998 | Not Available | Negative | 3858592 - 3859056 | 15811.1 |
| 3-isopropylmalate dehydratase large subunit | JCM19237_2999 | Not Available | Negative | 3859020 - 3859400 | 14178.7 |
| 3-isopropylmalate dehydrogenase | JCM19237_3000 | Not Available | Negative | 3859425 - 3860513 | 39301.0 |
| 2-isopropylmalate synthase | JCM19237_3001 | Not Available | Negative | 3860516 - 3862066 | 56545.3 |
| transcriptional regulator tetr family | JCM19237_3002 | Not Available | Positive | 3862644 - 3863126 | 18242.6 |
| transcriptional regulator tetr family | JCM19237_3003 | Not Available | Positive | 3863123 - 3863281 | 5915.41 |
| membrane fusion protein of rnd family multidrug efflux pump | JCM19237_3004 | Not Available | Positive | 3863284 - 3863850 | 20752.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
