Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dnaj-like protein djla | JCM19237_2975 | Not Available | Positive | 3844968 - 3845807 | 31254.6 |
| glycerate dehydrogenase | JCM19237_2976 | Not Available | Negative | 3845995 - 3846624 | 22132.6 |
| ribosomal large subunit pseudouridine synthase a | JCM19237_2977 | Not Available | Negative | 3847015 - 3847314 | 11263.5 |
| ribosomal large subunit pseudouridine synthase a | JCM19237_2978 | Not Available | Negative | 3847311 - 3847772 | 17717.3 |
| rna polymerase associated protein rapa | JCM19237_2979 | Not Available | Negative | 3847953 - 3848231 | 10350.5 |
| rna polymerase associated protein rapa | JCM19237_2980 | Not Available | Negative | 3848264 - 3848644 | 13598.5 |
| rna polymerase associated protein rapa | JCM19237_2981 | Not Available | Negative | 3848674 - 3848841 | 5994.11 |
| rna polymerase associated protein rapa | JCM19237_2982 | Not Available | Negative | 3848973 - 3849122 | 5643.76 |
| rna polymerase associated protein rapa | JCM19237_2983 | Not Available | Negative | 3849122 - 3850213 | 42086.2 |
| rna polymerase associated protein rapa | JCM19237_2984 | Not Available | Negative | 3850210 - 3850866 | 24594.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
