Photobacterium aphoticum

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium aphoticum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium aphoticum DNA, contig: contig00056, strain: JCM

Gene Summary

Adenine Count

1355547 bp

Thymine Count

1364935 bp

Guanine Count

1392623 bp

Cytosine Count

1299193 bp

Genome Length

5412298 bp

Protein-coding Genes

6938 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bis(5'-nucleosyl)-tetraphosphataseJCM19237_2965Not AvailableNegative3837975 - 38381004596.31
bis(5'-nucleosyl)-tetraphosphataseJCM19237_2966Not AvailableNegative3838100 - 383844113149.8
bis(5'-nucleosyl)-tetraphosphataseJCM19237_2967Not AvailableNegative3838438 - 383879113064.7
apag proteinJCM19237_2968Not AvailableNegative3838800 - 383918314000.7
ssu rrna (adenine(1518)-n(6)/adenine(1519)-n(6)) -dimethyltransferaseJCM19237_2969Not AvailableNegative3839260 - 384007230618.1
4-hydroxythreonine-4-phosphate dehydrogenaseJCM19237_2970Not AvailableNegative3840069 - 384048814822.9
4-hydroxythreonine-4-phosphate dehydrogenaseJCM19237_2971Not AvailableNegative3840478 - 384105920341.4
survival protein sura precursorJCM19237_2972Not AvailableNegative3841046 - 384151017123.1
survival protein sura precursorJCM19237_2973Not AvailableNegative3841539 - 384234829733.1
outer membrane protein impJCM19237_2974Not AvailableNegative3842416 - 384477989430.0

Displaying genes 5001 – 5010 of 11511 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.