Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type antimicrobial peptide transport system permease component | JCM19237_2925 | Not Available | Negative | 3809376 - 3810635 | 45970.5 |
| methionine abc transporter atp-binding protein | JCM19237_2926 | Not Available | Negative | 3810632 - 3811324 | 25692.1 |
| predicted zinc-binding protein | JCM19237_2927 | Not Available | Negative | 3811375 - 3811779 | 14909.4 |
| hypothetical protein | JCM19237_2928 | Not Available | Positive | 3811801 - 3811923 | 4807.63 |
| protein ytfj precursor | JCM19237_2929 | Not Available | Negative | 3812434 - 3812985 | 19638.5 |
| hypothetical protein | JCM19237_2930 | Not Available | Positive | 3813357 - 3813494 | 5128.26 |
| peptide methionine sulfoxide reductase msra | JCM19237_2931 | Not Available | Negative | 3813496 - 3813642 | 5143.09 |
| peptide methionine sulfoxide reductase msra | JCM19237_2932 | Not Available | Negative | 3813636 - 3814118 | 17310.7 |
| uncharacterized protein ytfm precursor | JCM19237_2933 | Not Available | Positive | 3814289 - 3814780 | 18004.8 |
| uncharacterized protein ytfm precursor | JCM19237_2934 | Not Available | Positive | 3814789 - 3815514 | 27327.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
