Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook-associated protein flid | JCM19237_3956 | Not Available | Positive | 3788220 - 3789095 | 31710.1 |
| hypothetical flagellar rod protein flai | JCM19237_3957 | Not Available | Positive | 3789106 - 3789402 | 11258.5 |
| flagellar biosynthesis protein flis | JCM19237_3958 | Not Available | Positive | 3789449 - 3789685 | 8583.77 |
| flagellar biosynthesis protein flis | JCM19237_3959 | Not Available | Positive | 3789682 - 3789819 | 5254.31 |
| hypothetical protein | JCM19237_3960 | Not Available | Negative | 3790002 - 3790124 | 4380.34 |
| flagellar regulatory protein fleq | JCM19237_3961 | Not Available | Positive | 3790219 - 3790521 | 11145.2 |
| flagellar regulatory protein fleq | JCM19237_3962 | Not Available | Positive | 3790533 - 3791249 | 26734.6 |
| flagellar regulatory protein fleq | JCM19237_3963 | Not Available | Positive | 3791283 - 3791678 | 14723.1 |
| flagellar sensor histidine kinase fles | JCM19237_3964 | Not Available | Positive | 3791832 - 3792920 | 39393.1 |
| flagellar regulatory protein fleq | JCM19237_3965 | Not Available | Positive | 3792917 - 3793039 | 4425.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
