Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar protein flgp | JCM19237_3926 | Not Available | Positive | 3768250 - 3768687 | 16725.0 |
| flagellar biosynthesis protein flgn | JCM19237_3927 | Not Available | Negative | 3768889 - 3769317 | 15856.1 |
| negative regulator of flagellin synthesis flgm | JCM19237_3928 | Not Available | Negative | 3769386 - 3769706 | 10999.8 |
| flagellar basal-body p-ring formation protein flga | JCM19237_3929 | Not Available | Negative | 3769883 - 3770590 | 25537.1 |
| chemotaxis protein chev | JCM19237_3930 | Not Available | Positive | 3770683 - 3771600 | 33663.1 |
| chemotaxis protein methyltransferase cher | JCM19237_3931 | Not Available | Positive | 3771717 - 3772448 | 27408.6 |
| flagellar basal-body rod protein flgb | JCM19237_3932 | Not Available | Positive | 3772993 - 3773214 | 7780.32 |
| flagellar basal-body rod protein flgb | JCM19237_3933 | Not Available | Positive | 3773211 - 3773387 | 6452.55 |
| flagellar basal-body rod protein flgc | JCM19237_3934 | Not Available | Positive | 3773391 - 3773807 | 14933.5 |
| flagellar basal-body rod modification protein flgd | JCM19237_3935 | Not Available | Positive | 3773826 - 3774539 | 25418.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
