Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulator of nonsense transcripts 1 homolog | JCM19237_5363 | Not Available | Negative | 319408 - 319854 | 16988.7 |
| regulator of nonsense transcripts 1 homolog | JCM19237_5364 | Not Available | Negative | 320062 - 320721 | 24693.5 |
| regulator of nonsense transcripts 1 homolog | JCM19237_5365 | Not Available | Negative | 320775 - 322505 | 64828.3 |
| regulator of nonsense transcripts 1 homolog | JCM19237_5366 | Not Available | Negative | 322619 - 324268 | 63055.3 |
| methyl-accepting chemotaxis protein | JCM19237_5367 | Not Available | Positive | 324919 - 326541 | 59306.6 |
| methyl-accepting chemotaxis protein | JCM19237_5368 | Not Available | Positive | 326538 - 326831 | 10354.1 |
| phosphodiesterase/alkaline phosphatase d | JCM19237_5369 | Not Available | Positive | 327501 - 327881 | 13999.4 |
| phosphodiesterase/alkaline phosphatase d | JCM19237_5370 | Not Available | Positive | 327878 - 329242 | 52055.0 |
| putative diheme cytochrome c-553 | JCM19237_5371 | Not Available | Negative | 329393 - 329602 | 7769.52 |
| putative diheme cytochrome c-553 | JCM19237_5372 | Not Available | Negative | 329616 - 330242 | 22797.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
