Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_3898 | Not Available | Negative | 3744695 - 3744937 | 8952.06 |
| hypothetical protein | JCM19237_3899 | Not Available | Negative | 3745038 - 3745292 | 9571.62 |
| hypothetical protein | JCM19237_3900 | Not Available | Negative | 3745244 - 3745867 | 23147.2 |
| arginine/ornithine antiporter arcd | JCM19237_3901 | Not Available | Positive | 3746409 - 3746894 | 18705.1 |
| hypothetical protein | JCM19237_3902 | Not Available | Positive | 3746878 - 3747123 | 9185.31 |
| hypothetical protein | JCM19237_3903 | Not Available | Positive | 3747078 - 3747281 | 7129.39 |
| diguanylate cyclase | JCM19237_3904 | Not Available | Negative | 3747337 - 3748896 | 58171.7 |
| predicted dye-decolorizing peroxidase (dyp) yfex-like subgroup | JCM19237_3905 | Not Available | Positive | 3749154 - 3750050 | 32867.3 |
| pts system glucose-specific iia component | JCM19237_3906 | Not Available | Negative | 3750490 - 3750999 | 18095.8 |
| phosphoenolpyruvate-protein phosphotransferase | JCM19237_3907 | Not Available | Negative | 3751040 - 3752767 | 63539.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
