Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na(+)-translocating nadh-quinone reductase subunit d | JCM19237_3868 | Not Available | Positive | 3718873 - 3719505 | 22971.0 |
| na(+)-translocating nadh-quinone reductase subunit e | JCM19237_3869 | Not Available | Positive | 3719513 - 3720109 | 21327.9 |
| na(+)-translocating nadh-quinone reductase subunit f | JCM19237_3870 | Not Available | Positive | 3720131 - 3721354 | 45113.0 |
| thiamin biosynthesis lipoprotein apbe | JCM19237_3871 | Not Available | Positive | 3721494 - 3721958 | 17055.6 |
| thiamin biosynthesis lipoprotein apbe | JCM19237_3872 | Not Available | Positive | 3721961 - 3722515 | 20141.2 |
| probable exported or periplasmic protein in apbe locus | JCM19237_3873 | Not Available | Positive | 3722526 - 3722747 | 8080.96 |
| dna polymerase iv | JCM19237_3874 | Not Available | Positive | 3722962 - 3724047 | 40929.6 |
| aminoacyl-histidine dipeptidase | JCM19237_3875 | Not Available | Negative | 3724368 - 3725693 | 47542.1 |
| hypothetical protein | JCM19237_3876 | Not Available | Negative | 3726978 - 3727100 | 4508.44 |
| xanthine/uracil/thiamine/ascorbate permease family protein | JCM19237_3877 | Not Available | Positive | 3727203 - 3728492 | 44967.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
