Photobacterium aphoticum

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium aphoticum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium aphoticum DNA, contig: contig00056, strain: JCM

Gene Summary

Adenine Count

1355547 bp

Thymine Count

1364935 bp

Guanine Count

1392623 bp

Cytosine Count

1299193 bp

Genome Length

5412298 bp

Protein-coding Genes

6938 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3,4-dihydroxy-2-butanone 4-phosphate synthaseJCM19237_3828Not AvailablePositive3694166 - 369464817062.5
3,4-dihydroxy-2-butanone 4-phosphate synthaseJCM19237_3829Not AvailablePositive3694645 - 369526822849.4
6,7-dimethyl-8-ribityllumazine synthaseJCM19237_3830Not AvailablePositive3695437 - 369590716315.6
transcription termination protein nusbJCM19237_3831Not AvailablePositive3695919 - 369637417236.7
thiamine-monophosphate kinaseJCM19237_3832Not AvailablePositive3696576 - 369742129588.2
phosphatidylglycerophosphatase aJCM19237_3833Not AvailablePositive3697425 - 369791017917.4
1-deoxy-d-xylulose 5-phosphate synthaseJCM19237_3834Not AvailableNegative3698046 - 369866922315.9
1-deoxy-d-xylulose 5-phosphate synthaseJCM19237_3835Not AvailableNegative3698663 - 369944228485.6
1-deoxy-d-xylulose 5-phosphate synthaseJCM19237_3836Not AvailableNegative3699439 - 36996457056.46
1-deoxy-d-xylulose 5-phosphate synthaseJCM19237_3837Not AvailableNegative3699663 - 36999269695.61

Displaying genes 4801 – 4810 of 11511 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.