Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_3818 | Not Available | Positive | 3688615 - 3688728 | 4358.1 |
| probable acetyltransferase | JCM19237_3819 | Not Available | Positive | 3688789 - 3689235 | 17200.2 |
| membrane protein | JCM19237_3820 | Not Available | Negative | 3689314 - 3689931 | 22837.0 |
| serine hydroxymethyltransferase | JCM19237_3821 | Not Available | Positive | 3690392 - 3690520 | 4868.59 |
| serine hydroxymethyltransferase | JCM19237_3822 | Not Available | Positive | 3690489 - 3691640 | 41290.4 |
| ribonucleotide reductase transcriptional regulator nrdr | JCM19237_3823 | Not Available | Positive | 3691836 - 3692285 | 17121.5 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase | JCM19237_3824 | Not Available | Positive | 3692336 - 3693034 | 24769.0 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase | JCM19237_3825 | Not Available | Positive | 3693031 - 3693345 | 10987.3 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase | JCM19237_3826 | Not Available | Positive | 3693351 - 3693464 | 4115.03 |
| riboflavin synthase eubacterial/eukaryotic | JCM19237_3827 | Not Available | Positive | 3693473 - 3694129 | 23510.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
