Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_3808 | Not Available | Negative | 3680333 - 3680470 | 5445.84 |
| transglycosylase slt family | JCM19237_3809 | Not Available | Negative | 3680743 - 3681708 | 36586.1 |
| hypothetical protein | JCM19237_3810 | Not Available | Negative | 3681693 - 3681818 | 4831.69 |
| transglycosylase slt family | JCM19237_3811 | Not Available | Negative | 3681824 - 3682318 | 18730.6 |
| phosphoribosylformylglycinamidine synthase synthetase subunit and glutamine amidotransferase subunit | JCM19237_3812 | Not Available | Positive | 3682679 - 3683758 | 39908.6 |
| phosphoribosylformylglycinamidine synthase synthetase subunit and glutamine amidotransferase subunit | JCM19237_3813 | Not Available | Positive | 3683755 - 3684342 | 21049.0 |
| phosphoribosylformylglycinamidine synthase synthetase subunit and glutamine amidotransferase subunit | JCM19237_3814 | Not Available | Positive | 3684354 - 3686570 | 80130.0 |
| 2-haloalkanoic acid dehalogenase | JCM19237_3815 | Not Available | Positive | 3686812 - 3687489 | 25371.2 |
| hypothetical protein | JCM19237_3816 | Not Available | Positive | 3687628 - 3687888 | 9017.24 |
| nitrogen regulatory protein p-ii | JCM19237_3817 | Not Available | Positive | 3688148 - 3688486 | 12508.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
