Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chitinase | JCM19237_2820 | Not Available | Positive | 3664961 - 3665398 | 15531.4 |
| hypothetical protein | JCM19237_2821 | Not Available | Positive | 3665521 - 3665976 | 17377.3 |
| Trna-val | Not Available | Not Available | Positive | 3666066 - 3666141 | Not Available |
| t1ss secreted agglutinin rtx | JCM19237_3791 | Not Available | Positive | 3666226 - 3666504 | 9847.71 |
| t1ss secreted agglutinin rtx | JCM19237_3792 | Not Available | Positive | 3666456 - 3666821 | 13038.3 |
| t1ss secreted agglutinin rtx | JCM19237_3793 | Not Available | Positive | 3666773 - 3667138 | 13264.5 |
| t1ss secreted agglutinin rtx | JCM19237_3794 | Not Available | Positive | 3667090 - 3667830 | 25819.2 |
| t1ss secreted agglutinin rtx | JCM19237_3795 | Not Available | Positive | 3667878 - 3670358 | 87998.5 |
| exodeoxyribonuclease vii large subunit | JCM19237_3796 | Not Available | Negative | 3670545 - 3671837 | 48184.6 |
| hypothetical protein | JCM19237_3797 | Not Available | Positive | 3671854 - 3671967 | 4003.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
